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#academicchatter

58 posts49 participants13 posts today

Last year at the Open Science Retreat (#OSR24NL) I have been introduced to nanopubs by @egonw and created my first nanopub declaring citations for a paper using CiTOs (citation ontologies).

Now, travelling to #OSR25CH, due to issues with the train network foreseen with plenty of time, I use the opportunity and created a new one ( w3id.org/np/RAicq7k9QHX8EG8ho7 ) for my latest publication on teaching #Snakemake on #HPC systems.

The teaching material is — again — in desperate need of additions and overhaul, but that is for another day.

w3id.orgRAicq7k9QH (explore) | nanodash

BREAKING: TU Delft Strike programme was just released! 🔥🟥

🗓️ Date: 24 April 2025
📍 Main location: The field between Pulse and the Library
🕛 From 12:00: Free fries, speakers, music, and collective action!

Here’s what the day will look like:
🪧 08:30–12:00: Picket lines, banner making & walkouts
🚶‍♀️ 11:30: Coordinated walkout from all faculties
🎤 12:30: Stage programme with speeches and live music
✊ 13:15: March to Delft city centre
🔬 15:00–16:00+: Science fair & public mini-lectures

More info: linktr.ee/tudelft_strikes

Striking is your legal right.

No lectures. No meetings. No business as usual.

See you on April 24! 🔥🟥

LinktreeTU Delft Strikes | LinktreeTU Delft strikes on April 24 against the destructive budget cuts. Get involved!

I spent the day rectifying segmentation and tracking for bacteria in microfluidic devices. 1000 frames, 5 chambers, ~8 cells per chamber, so 40000 pictures of cells to look at, and check that they match frame to frame. I think I'm done with screens for the day. Fortunately automation helps, and drawing the lineages as graphs allows to spot errors more easily.
Now I have a clean dataset that I can analyse and also use as a training dataset for the next iteration!